Loading...
Thumbnail Image
Item

A novel genotoxin-specific qPCR array based on the metabolically competent human HepaRG™ cell line as a rapid and reliable tool for improved in vitro hazard assessment

Ates, Gamze
Heymans, Anja
Verschaeve, Luc
Milushev, Dimiter
Vanparys, Philippe
Rogiers, Vera
Doktorova, Tatyana Y.
Citations
Altmetric:
Abstract

Although the value of the regulatory accepted batteries for in vitro genotoxicity testing is recognized, they result in a high

;

number of false positives. This has a major impact on society and industries developing novel compounds for pharmaceutical,

;

chemical, and consumer products, as afflicted compounds have to be (prematurely) abandoned or further tested on

;

animals. Using the metabolically competent human HepaRG

;

™ cell line and toxicogenomics approaches, we have developed

;

an upgraded, innovative, and proprietary gene classifier. This gene classifier is based on transcriptomic changes induced by

;

12 genotoxic and 12 non-genotoxic reference compounds tested at sub-cytotoxic concentrations, i.e., IC10 concentrations

;

as determined by the 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) assay. The resulting gene classifier

;

was translated into an easy-to-handle qPCR array that, as shown by pathway analysis, covers several different cellular

;

processes related to genotoxicity. To further assess the predictivity of the tool, a set of 5 known positive and 5 known negative

;

test compounds for genotoxicity was evaluated. In addition, 2 compounds with debatable genotoxicity data were tested

;

to explore how the qPCR array would classify these. With an accuracy of 100%, when equivocal results were considered

;

positive, the results showed that combining HepaRG

;

™ cells with a genotoxin-specific qPCR array can improve (geno)toxicological

;

hazard assessment. In addition, the developed qPCR array was able to provide additional information on compounds

;

for which so far debatable genotoxicity data are available. The results indicate that the new in vitro tool can improve human

;

safety assessment of chemicals in general by basing predictions on mechanistic toxicogenomics information.

Description
Date
2018-06-02
Journal Title
Journal ISSN
Volume Title
Publisher
Chapter title
Publication type
Peer reviewed scientific article
Research Projects
Organizational Units
Journal Issue
Keywords
genotoxicity, HepaRG, In vitro screening, mutagenicity, qPCR array, Toxicogenomics
Citation
Topic(s)
Related project
Embedded videos