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Viral interference of the bacterial RNA metabolism machinery.

Dendooven, Tom
Hendrix, Hanne
Voet, Marleen
Bandyra, K J.
De Maeyer, Marc
Aertsen, Abram
Noben, Jean-Paul
Hardwick, Steven W.
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Abstract

In a recent publication, we reported a unique interaction between a protein encoded by the giant myovirus phiKZ and the Pseudomonas aeruginosa RNA degradosome. Crystallography, site-directed mutagenesis and interactomics approaches revealed this 'degradosome interacting protein' or Dip, to adopt an 'open-claw' dimeric structure that presents acidic patches on its outer surface which hijack 2 conserved RNA binding sites on the scaffold domain of the RNase E component of the RNA degradosome. This interaction prevents substrate RNAs from being bound and degraded by the RNA degradosome during the virus infection cycle. In this commentary, we provide a perspective into the biological role of Dip, its structural analysis and its mysterious evolutionary origin, and we suggest some therapeutic and biotechnological applications of this distinctive viral protein.

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2016-12-31
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Peer reviewed scientific article
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bacteria, Bacteriophages, Endoribonucleases, Host-Pathogen Interactions, Multienzyme Complexes, Polyribonucleotide Nucleotidyltransferase, Protein Binding, Pseudomonas aeruginosa, RNA Helicases, RNA Stability, RNA, Bacterial
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